Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 AC020658.6-201ENST00000623564 1870 ntBASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 AC254562.1-201ENST00000417586 456 ntBASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 PHKG1P2-201ENST00000457537 863 ntBASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 AC009093.7-201ENST00000623853 1223 ntBASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 CICP13-201ENST00000422015 2789 ntBASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC136621.1-201ENST00000624017 2304 ntBASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC018892.3-201ENST00000623986 2499 ntBASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC023141.5-201ENST00000458585 616 ntBASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC105021.1-202ENST00000570572 669 ntBASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA11Q9Y5H2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 GPS2P2-201ENST00000430745 888 ntBASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms