Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC21.37■■□□□ 1.01
NINLQ9Y2I6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
NINLQ9Y2I6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.37■■□□□ 1.01
NINLQ9Y2I6 AL138799.1-201ENST00000448213 1675 ntBASIC21.37■■□□□ 1.01
NINLQ9Y2I6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NINLQ9Y2I6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NINLQ9Y2I6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 MIR1908-201ENST00000410394 80 ntBASIC21.36■■□□□ 1.01
NINLQ9Y2I6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 FO681548.1-201ENST00000455617 1132 ntBASIC21.36■■□□□ 1.01
NINLQ9Y2I6 RNA5SP423-201ENST00000517127 109 ntBASIC21.36■■□□□ 1.01
NINLQ9Y2I6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 AC084364.1-201ENST00000551967 1556 ntBASIC21.36■■□□□ 1.01
NINLQ9Y2I6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 RPL7P3-201ENST00000441388 714 ntBASIC21.36■■□□□ 1.01
NINLQ9Y2I6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.36■■□□□ 1.01
NINLQ9Y2I6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 ACTBP8-201ENST00000403258 1108 ntBASIC21.35■■□□□ 1.01
NINLQ9Y2I6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.35■■□□□ 1.01
NINLQ9Y2I6 AL139099.5-201ENST00000635274 300 ntBASIC21.35■■□□□ 1.01
NINLQ9Y2I6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 BCRP2-202ENST00000447763 634 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 KLF2P4-201ENST00000451959 1225 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AC099548.2-209ENST00000480264 625 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 BCRP6-201ENST00000510112 632 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 BCRP7-201ENST00000511549 544 ntBASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NINLQ9Y2I6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms