Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 MIR663B-201ENST00000408361 115 ntBASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 AC079328.1-201ENST00000560358 952 ntBASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDLIM7Q9NR12 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SLED1-202ENST00000512051 380 ntBASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 ACTG1P17-201ENST00000558391 1119 ntBASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 LINC02199-201ENST00000506655 2702 ntBASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDLIM7Q9NR12 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 CNN2P8-201ENST00000421872 913 ntBASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 C2orf27AP3-201ENST00000434123 579 ntBASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AL354718.3-201ENST00000616414 581 ntBASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AL008638.5-201ENST00000623814 1298 ntBASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 CR382287.1-201ENST00000623954 586 ntBASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms