Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RAB43P1-201ENST00000561790 589 ntBASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AC244669.2-201ENST00000612320 853 ntBASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 AL358472.5-202ENST00000641448 1267 ntBASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC5.35□□□□□ -1.55
KRTAP4-3Q9BYR4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC022188.1-201ENST00000620960 1664 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AL121723.1-201ENST00000445194 1519 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 PDIA3P1-201ENST00000471856 1510 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AL391825.1-201ENST00000457671 1364 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC018665.1-201ENST00000622927 1362 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC093525.8-201ENST00000624099 1342 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC098614.1-201ENST00000368528 745 ntBASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC5.34□□□□□ -1.55
KRTAP4-3Q9BYR4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms