Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC097637.2-201ENST00000624096 1997 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 SPDYE21P-201ENST00000413323 827 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 LAGE3P1-201ENST00000425356 484 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 HNRNPDP1-201ENST00000439535 754 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 AC092910.1-201ENST00000482027 1129 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 TERC-201ENST00000602385 541 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 GPALPP1-207ENST00000611650 899 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 MIR574-201ENST00000385209 96 ntBASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SLC25A1P1-201ENST00000528351 927 ntBASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AL049840.3-201ENST00000602669 611 ntBASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC008735.5-201ENST00000623544 497 ntBASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC079776.2-201ENST00000641154 1609 ntBASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.32□□□□□ -0.44
NDUFAF3Q9BU61 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms