Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB40CQ96S21 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB40CQ96S21 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 KRT18P27-201ENST00000427733 1299 ntBASIC12.86□□□□□ -0.35
RAB40CQ96S21 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SAPCD2P3-201ENST00000455031 850 ntBASIC12.86□□□□□ -0.35
RAB40CQ96S21 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 AJ011931.1-201ENST00000618749 2492 ntBASIC12.86□□□□□ -0.35
RAB40CQ96S21 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ZBED1P1-201ENST00000502364 1930 ntBASIC12.86□□□□□ -0.35
RAB40CQ96S21 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RAB40CQ96S21 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB40CQ96S21 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 UNC93B7-201ENST00000509439 705 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AC243562.2-201ENST00000561247 970 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AC002347.1-201ENST00000569543 541 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms