Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MIR769-201ENST00000390225 118 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 EEF1DP6-201ENST00000449232 372 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 RN7SL11P-201ENST00000471305 293 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MESTP3-201ENST00000503460 968 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC116345.2-201ENST00000512837 523 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC134698.3-201ENST00000523880 214 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC009955.4-201ENST00000597192 544 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AL603832.2-201ENST00000566195 2125 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AC079336.7-201ENST00000623428 1078 ntBASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
COL27A1Q8IZC6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 DPM3-202ENST00000368399 517 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RNMTL1P1-201ENST00000454103 560 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC005324.6-201ENST00000587972 613 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 BNIP3P13-201ENST00000599968 566 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 YRDCP1-201ENST00000621419 643 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms