Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 AL162727.3-201ENST00000635661 2787 ntBASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 TSPY16P-201ENST00000449843 468 ntBASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBWD2Q8IUF1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 GNAQP1-201ENST00000444815 1067 ntBASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 SERBP1P5-201ENST00000510079 1181 ntBASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 TIMM17BP1-201ENST00000545713 516 ntBASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.09■□□□□ 0.33
CBWD2Q8IUF1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms