Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC007191.1-201ENST00000623179 2995 ntBASIC13.74□□□□□ -0.21
UBA52P62987 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.73□□□□□ -0.21
UBA52P62987 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
UBA52P62987 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 AC092919.2-201ENST00000623631 1645 ntBASIC13.73□□□□□ -0.21
UBA52P62987 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
UBA52P62987 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.73□□□□□ -0.21
UBA52P62987 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.73□□□□□ -0.21
UBA52P62987 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 PAWRP1-201ENST00000451083 565 ntBASIC13.73□□□□□ -0.21
UBA52P62987 COX20P2-201ENST00000452636 358 ntBASIC13.73□□□□□ -0.21
UBA52P62987 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 AC109322.1-201ENST00000524499 1264 ntBASIC13.73□□□□□ -0.21
UBA52P62987 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.73□□□□□ -0.21
UBA52P62987 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 AC138969.2-201ENST00000532739 9932 ntBASIC13.73□□□□□ -0.21
UBA52P62987 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBA52P62987 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UBA52P62987 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBA52P62987 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UBA52P62987 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.72□□□□□ -0.21
UBA52P62987 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.72□□□□□ -0.21
UBA52P62987 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
UBA52P62987 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 AC002056.1-201ENST00000395613 760 ntBASIC13.72□□□□□ -0.21
UBA52P62987 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.72□□□□□ -0.21
UBA52P62987 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 TIMM8BP1-201ENST00000452384 211 ntBASIC13.72□□□□□ -0.21
UBA52P62987 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.72□□□□□ -0.21
UBA52P62987 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.72□□□□□ -0.21
UBA52P62987 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 AC239800.4-201ENST00000603712 296 ntBASIC13.72□□□□□ -0.21
UBA52P62987 ACTL9-202ENST00000612068 1252 ntBASIC13.72□□□□□ -0.21
UBA52P62987 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UBA52P62987 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBA52P62987 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms