Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPFP49454 AGGF1P2-201ENST00000426656 2106 ntBASIC17.43■□□□□ 0.38
CENPFP49454 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CENPFP49454 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CENPFP49454 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPFP49454 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPFP49454 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 PRAL-201ENST00000624952 3286 ntBASIC17.42■□□□□ 0.38
CENPFP49454 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPFP49454 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.42■□□□□ 0.38
CENPFP49454 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 AC009093.2-202ENST00000620513 2079 ntBASIC17.42■□□□□ 0.38
CENPFP49454 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CENPFP49454 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CENPFP49454 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPFP49454 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 KRT8P4-201ENST00000509735 1454 ntBASIC17.42■□□□□ 0.38
CENPFP49454 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CENPFP49454 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 AC097065.1-201ENST00000425737 517 ntBASIC17.42■□□□□ 0.38
CENPFP49454 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.42■□□□□ 0.38
CENPFP49454 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPFP49454 AC098935.1-201ENST00000446057 611 ntBASIC17.42■□□□□ 0.38
CENPFP49454 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPFP49454 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.42■□□□□ 0.38
CENPFP49454 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.42■□□□□ 0.38
CENPFP49454 PGAM1P5-201ENST00000548011 764 ntBASIC17.42■□□□□ 0.38
CENPFP49454 AL160314.3-201ENST00000556041 767 ntBASIC17.42■□□□□ 0.38
CENPFP49454 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPFP49454 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.42■□□□□ 0.38
CENPFP49454 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPFP49454 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPFP49454 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.41■□□□□ 0.38
CENPFP49454 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.41■□□□□ 0.38
CENPFP49454 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.41■□□□□ 0.38
CENPFP49454 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 AC019193.1-201ENST00000506678 823 ntBASIC17.41■□□□□ 0.38
CENPFP49454 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.41■□□□□ 0.38
CENPFP49454 AL805961.1-201ENST00000642026 753 ntBASIC17.41■□□□□ 0.38
CENPFP49454 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.41■□□□□ 0.38
CENPFP49454 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CENPFP49454 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CENPFP49454 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.41■□□□□ 0.38
CENPFP49454 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.41■□□□□ 0.38
CENPFP49454 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CENPFP49454 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.41■□□□□ 0.38
CENPFP49454 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.41■□□□□ 0.38
CENPFP49454 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.41■□□□□ 0.38
CENPFP49454 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CENPFP49454 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CENPFP49454 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms