Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM3P0C091 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM3P0C091 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
FREM3P0C091 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
FREM3P0C091 HAUS4P1-201ENST00000406739 1145 ntBASIC14.32□□□□□ -0.12
FREM3P0C091 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM3P0C091 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.32□□□□□ -0.12
FREM3P0C091 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
FREM3P0C091 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM3P0C091 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FREM3P0C091 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
FREM3P0C091 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.31□□□□□ -0.12
FREM3P0C091 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.31□□□□□ -0.12
FREM3P0C091 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 RRP7BP-205ENST00000566851 833 ntBASIC14.31□□□□□ -0.12
FREM3P0C091 AC239800.4-201ENST00000603712 296 ntBASIC14.31□□□□□ -0.12
FREM3P0C091 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
FREM3P0C091 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM3P0C091 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
FREM3P0C091 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM3P0C091 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM3P0C091 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
FREM3P0C091 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
FREM3P0C091 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.3□□□□□ -0.12
FREM3P0C091 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.3□□□□□ -0.12
FREM3P0C091 RN7SL399P-201ENST00000471648 279 ntBASIC14.3□□□□□ -0.12
FREM3P0C091 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM3P0C091 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM3P0C091 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms