Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA11Q9Y5H2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC006486.2-201ENST00000624246 2199 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC211486.1-202ENST00000416371 468 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 FAM58DP-201ENST00000428076 619 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC211476.1-201ENST00000503899 468 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC093520.2-201ENST00000561830 333 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC018529.1-201ENST00000613063 361 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 AC104581.4-201ENST00000623126 3052 ntBASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PCDHGA11Q9Y5H2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 RBPMS2P1-201ENST00000437762 623 ntBASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 EEF1DP4-201ENST00000446006 880 ntBASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 AC092865.5-201ENST00000545435 363 ntBASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 AL450472.2-201ENST00000603663 1156 ntBASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA11Q9Y5H2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA11Q9Y5H2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms