Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTDP1Q9Y5B0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 KRT18P64-201ENST00000434946 1219 ntBASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTDP1Q9Y5B0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 MIR1909-201ENST00000411312 80 ntBASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SOCS2P1-201ENST00000417727 557 ntBASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AC136604.1-201ENST00000418535 575 ntBASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 AC008735.3-201ENST00000596646 500 ntBASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CTDP1Q9Y5B0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTDP1Q9Y5B0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms