Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 REXO1L1P-202ENST00000608646 1974 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 LINC00552-201ENST00000625151 2579 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 IGLL3P-201ENST00000412472 434 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 VN2R19P-201ENST00000442399 1052 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 FAM197Y8-203ENST00000450145 560 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 LINC00528-201ENST00000600723 2160 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 IFNL4P1-201ENST00000607083 540 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 AC023024.2-201ENST00000623561 1993 ntBASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
UBE2D4Q9Y2X8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AC007191.1-201ENST00000623179 2995 ntBASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 BNIP3P1-202ENST00000550043 1585 ntBASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AL691432.1-201ENST00000596308 1422 ntBASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 KRT18P67-201ENST00000432816 1264 ntBASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AC140658.5-201ENST00000438532 169 ntBASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms