Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 GAPDHP40-201ENST00000505218 1006 ntBASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PAAF1Q9BRP4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AC134312.5-201ENST00000568031 1313 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 BOLA2P3-201ENST00000404566 256 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AC012441.1-201ENST00000446669 685 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 FTH1P14-201ENST00000482930 551 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AP001582.1-201ENST00000525856 295 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AP001063.1-201ENST00000568332 529 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 AC244669.2-201ENST00000612320 853 ntBASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PAAF1Q9BRP4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PAAF1Q9BRP4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms