Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.82■□□□□ 0.44
PTPN18Q99952 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.82■□□□□ 0.44
PTPN18Q99952 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.82■□□□□ 0.44
PTPN18Q99952 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 AP003419.4-201ENST00000616071 517 ntBASIC17.82■□□□□ 0.44
PTPN18Q99952 AL353726.2-201ENST00000623259 884 ntBASIC17.82■□□□□ 0.44
PTPN18Q99952 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PTPN18Q99952 BCL2-203ENST00000589955 5011 ntBASIC17.82■□□□□ 0.44
PTPN18Q99952 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PTPN18Q99952 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTPN18Q99952 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN18Q99952 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN18Q99952 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 AL354877.1-201ENST00000424412 413 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 HIST2H2BB-201ENST00000449108 381 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 AC012618.1-201ENST00000461223 412 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN18Q99952 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPN18Q99952 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.81■□□□□ 0.44
PTPN18Q99952 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN18Q99952 OR10B1P-201ENST00000601666 907 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 AC025181.2-201ENST00000606994 802 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTPN18Q99952 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN18Q99952 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 LRRC59-203ENST00000576448 1531 ntBASIC17.81■□□□□ 0.44
PTPN18Q99952 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN18Q99952 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN18Q99952 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PTPN18Q99952 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN18Q99952 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN18Q99952 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 AL139094.1-201ENST00000405549 1188 ntBASIC17.8■□□□□ 0.44
PTPN18Q99952 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 POM121L8P-201ENST00000417732 1281 ntBASIC17.8■□□□□ 0.44
PTPN18Q99952 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN18Q99952 POM121L9P-203ENST00000441984 1285 ntBASIC17.8■□□□□ 0.44
PTPN18Q99952 AL391280.1-201ENST00000506969 1062 ntBASIC17.8■□□□□ 0.44
PTPN18Q99952 AC005740.2-201ENST00000511085 419 ntBASIC17.8■□□□□ 0.44
PTPN18Q99952 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN18Q99952 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN18Q99952 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN18Q99952 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN18Q99952 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN18Q99952 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN18Q99952 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN18Q99952 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN18Q99952 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 AC106886.4-201ENST00000623557 2502 ntBASIC17.79■□□□□ 0.44
PTPN18Q99952 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN18Q99952 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN18Q99952 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms