Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SMOQ99835 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 AC098614.1-201ENST00000368528 745 ntBASIC16.48■□□□□ 0.23
SMOQ99835 AP006294.1-201ENST00000415407 339 ntBASIC16.48■□□□□ 0.23
SMOQ99835 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.48■□□□□ 0.23
SMOQ99835 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.48■□□□□ 0.23
SMOQ99835 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.48■□□□□ 0.23
SMOQ99835 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.48■□□□□ 0.23
SMOQ99835 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.48■□□□□ 0.23
SMOQ99835 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SMOQ99835 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.48■□□□□ 0.23
SMOQ99835 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.48■□□□□ 0.23
SMOQ99835 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.48■□□□□ 0.23
SMOQ99835 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.48■□□□□ 0.23
SMOQ99835 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.48■□□□□ 0.23
SMOQ99835 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SMOQ99835 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.47■□□□□ 0.23
SMOQ99835 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.47■□□□□ 0.23
SMOQ99835 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SMOQ99835 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
SMOQ99835 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMOQ99835 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.47■□□□□ 0.23
SMOQ99835 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
SMOQ99835 AL442647.2-201ENST00000429864 857 ntBASIC16.47■□□□□ 0.23
SMOQ99835 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.47■□□□□ 0.23
SMOQ99835 GAPDHP21-201ENST00000450301 1010 ntBASIC16.47■□□□□ 0.23
SMOQ99835 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.47■□□□□ 0.23
SMOQ99835 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMOQ99835 AL049840.4-201ENST00000602422 811 ntBASIC16.47■□□□□ 0.23
SMOQ99835 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMOQ99835 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.47■□□□□ 0.23
SMOQ99835 CROCCP1-201ENST00000426910 5675 ntBASIC16.47■□□□□ 0.23
SMOQ99835 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMOQ99835 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMOQ99835 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.46■□□□□ 0.23
SMOQ99835 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.46■□□□□ 0.23
SMOQ99835 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 AC105250.1-201ENST00000509378 2057 ntBASIC16.46■□□□□ 0.23
SMOQ99835 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMOQ99835 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.46■□□□□ 0.23
SMOQ99835 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.46■□□□□ 0.23
SMOQ99835 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMOQ99835 AC005034.1-201ENST00000426657 489 ntBASIC16.46■□□□□ 0.23
SMOQ99835 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.46■□□□□ 0.23
SMOQ99835 VDAC1P7-201ENST00000462417 847 ntBASIC16.46■□□□□ 0.23
SMOQ99835 RN7SL752P-201ENST00000463779 287 ntBASIC16.46■□□□□ 0.23
SMOQ99835 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.46■□□□□ 0.23
SMOQ99835 AL359711.2-201ENST00000563105 872 ntBASIC16.46■□□□□ 0.23
SMOQ99835 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms