Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AC022748.3-201ENST00000621828 275 ntBASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 AL133373.2-201ENST00000623187 2828 ntBASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM43Q96BQ3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC007274.2-201ENST00000421675 662 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AL596276.2-201ENST00000447525 331 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC005740.2-201ENST00000511085 419 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AC073413.1-201ENST00000603927 732 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 AP001002.3-201ENST00000623482 206 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 PRSS30P-206ENST00000641773 873 ntBASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM43Q96BQ3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 RN7SL713P-201ENST00000582127 302 ntBASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM43Q96BQ3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM43Q96BQ3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRIM43Q96BQ3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
TRIM43Q96BQ3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 AC106820.2-201ENST00000563775 3264 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 KRT8P4-201ENST00000509735 1454 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms