Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APH1AQ96BI3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 PCDHA1-201ENST00000378133 2726 ntBASIC14.02□□□□□ -0.16
APH1AQ96BI3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.02□□□□□ -0.16
APH1AQ96BI3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APH1AQ96BI3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 AC002472.2-201ENST00000442739 958 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 TERF1P3-201ENST00000505638 1227 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 AC104794.3-201ENST00000566840 1248 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 RN7SL204P-201ENST00000582831 262 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 LINC02560-201ENST00000596379 459 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 AC004233.3-201ENST00000607794 1269 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 AC008761.3-201ENST00000624803 892 ntBASIC14.02□□□□□ -0.17
APH1AQ96BI3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APH1AQ96BI3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
APH1AQ96BI3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 LINC02199-201ENST00000506655 2702 ntBASIC14.01□□□□□ -0.17
APH1AQ96BI3 MIR600HG-201ENST00000449175 5984 ntBASIC14.01□□□□□ -0.17
APH1AQ96BI3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.01□□□□□ -0.17
APH1AQ96BI3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 MIR3197-201ENST00000582241 73 ntBASIC14.01□□□□□ -0.17
APH1AQ96BI3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
APH1AQ96BI3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.01□□□□□ -0.17
APH1AQ96BI3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms