Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
VPS8Q8N3P4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VPS8Q8N3P4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VPS8Q8N3P4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AP003680.1-201ENST00000598970 3660 ntBASIC24.32■■□□□ 1.48
VPS8Q8N3P4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 IGHV3-71-201ENST00000523324 359 ntBASIC24.32■■□□□ 1.48
VPS8Q8N3P4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 AL512343.1-201ENST00000605837 169 ntBASIC24.32■■□□□ 1.48
VPS8Q8N3P4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
VPS8Q8N3P4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 PRAL-201ENST00000624952 3286 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 AC092933.1-201ENST00000393644 945 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 PGGT1BP2-201ENST00000398621 1028 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 KRT90P-201ENST00000549264 1064 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 BTNL10-201ENST00000595971 695 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 KRT8P44-201ENST00000441609 1350 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 REXO1L4P-201ENST00000605109 1937 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 AC007787.1-201ENST00000588095 1583 ntBASIC24.31■■□□□ 1.48
VPS8Q8N3P4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS8Q8N3P4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 ACKR1-201ENST00000368121 1240 ntBASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 MIR1909-201ENST00000411312 80 ntBASIC24.3■■□□□ 1.48
VPS8Q8N3P4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 SLC25A47P1-201ENST00000531577 414 ntBASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 BX539320.1-201ENST00000623759 877 ntBASIC24.3■■□□□ 1.48
VPS8Q8N3P4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS8Q8N3P4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms