Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AC009407.1-201ENST00000568958 598 ntBASIC16.62■□□□□ 0.25
RNF43Q68DV7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AC006449.6-201ENST00000612330 2296 ntBASIC16.62■□□□□ 0.25
RNF43Q68DV7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 KRT8P12-202ENST00000472924 1397 ntBASIC16.62■□□□□ 0.25
RNF43Q68DV7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF43Q68DV7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF43Q68DV7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 AC022144.1-201ENST00000602255 1580 ntBASIC16.61■□□□□ 0.25
RNF43Q68DV7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 EEF1DP4-201ENST00000446006 880 ntBASIC16.61■□□□□ 0.25
RNF43Q68DV7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF43Q68DV7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF43Q68DV7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 U91328.1-201ENST00000437528 223 ntBASIC16.6■□□□□ 0.25
RNF43Q68DV7 MTND6P24-201ENST00000440466 518 ntBASIC16.6■□□□□ 0.25
RNF43Q68DV7 AL139010.1-201ENST00000454878 894 ntBASIC16.6■□□□□ 0.25
RNF43Q68DV7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF43Q68DV7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
RNF43Q68DV7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms