Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 AC067750.1-201ENST00000608826 6545 ntBASIC11.25□□□□□ -0.61
RPL39P62891 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RPL39P62891 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 AP001282.1-201ENST00000531301 1499 ntBASIC11.25□□□□□ -0.61
RPL39P62891 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RPL39P62891 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.25□□□□□ -0.61
RPL39P62891 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RPL39P62891 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RPL39P62891 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 AC018892.3-201ENST00000623986 2499 ntBASIC11.24□□□□□ -0.61
RPL39P62891 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RPL39P62891 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 LAGE3P1-201ENST00000425356 484 ntBASIC11.24□□□□□ -0.61
RPL39P62891 DUSP5P1-201ENST00000441325 1139 ntBASIC11.24□□□□□ -0.61
RPL39P62891 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 MIR4515-201ENST00000584082 81 ntBASIC11.24□□□□□ -0.61
RPL39P62891 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.24□□□□□ -0.61
RPL39P62891 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 AC015656.1-201ENST00000624209 3578 ntBASIC11.24□□□□□ -0.61
RPL39P62891 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.24□□□□□ -0.61
RPL39P62891 AC126365.1-201ENST00000578585 1514 ntBASIC11.24□□□□□ -0.61
RPL39P62891 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RPL39P62891 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 AC005840.4-201ENST00000541242 2494 ntBASIC11.24□□□□□ -0.61
RPL39P62891 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RPL39P62891 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 AJ011931.1-201ENST00000618749 2492 ntBASIC11.23□□□□□ -0.61
RPL39P62891 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.23□□□□□ -0.61
RPL39P62891 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.23□□□□□ -0.61
RPL39P62891 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms