Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL15A1P39059 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.8■□□□□ 0.76
COL15A1P39059 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.8■□□□□ 0.76
COL15A1P39059 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.8■□□□□ 0.76
COL15A1P39059 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.79■□□□□ 0.76
COL15A1P39059 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL15A1P39059 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL15A1P39059 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.79■□□□□ 0.76
COL15A1P39059 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 CALR4P-201ENST00000431943 946 ntBASIC19.79■□□□□ 0.76
COL15A1P39059 AL591846.1-201ENST00000451736 433 ntBASIC19.79■□□□□ 0.76
COL15A1P39059 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.79■□□□□ 0.76
COL15A1P39059 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.79■□□□□ 0.76
COL15A1P39059 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.79■□□□□ 0.76
COL15A1P39059 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.79■□□□□ 0.76
COL15A1P39059 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.79■□□□□ 0.76
COL15A1P39059 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL15A1P39059 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
COL15A1P39059 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL15A1P39059 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 AHCYP2-201ENST00000430630 1300 ntBASIC19.78■□□□□ 0.76
COL15A1P39059 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.78■□□□□ 0.76
COL15A1P39059 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.78■□□□□ 0.76
COL15A1P39059 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 MTX1P1-201ENST00000440904 838 ntBASIC19.78■□□□□ 0.76
COL15A1P39059 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.78■□□□□ 0.76
COL15A1P39059 IGHJ2P-201ENST00000454480 60 ntBASIC19.78■□□□□ 0.76
COL15A1P39059 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 AP001258.2-201ENST00000529891 490 ntBASIC19.78■□□□□ 0.76
COL15A1P39059 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.78■□□□□ 0.76
COL15A1P39059 RHOQP1-201ENST00000555758 579 ntBASIC19.78■□□□□ 0.76
COL15A1P39059 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.78■□□□□ 0.76
COL15A1P39059 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.78■□□□□ 0.76
COL15A1P39059 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.78■□□□□ 0.76
COL15A1P39059 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.78■□□□□ 0.76
COL15A1P39059 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL15A1P39059 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL15A1P39059 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.77■□□□□ 0.76
COL15A1P39059 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL15A1P39059 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.77■□□□□ 0.76
COL15A1P39059 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms