Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 AL596257.1-201ENST00000641463 2694 ntBASIC16.69■□□□□ 0.26
RFC1P35251 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFC1P35251 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.69■□□□□ 0.26
RFC1P35251 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.69■□□□□ 0.26
RFC1P35251 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.69■□□□□ 0.26
RFC1P35251 HNRNPUP1-201ENST00000554987 333 ntBASIC16.69■□□□□ 0.26
RFC1P35251 AL079307.3-201ENST00000556114 283 ntBASIC16.69■□□□□ 0.26
RFC1P35251 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.69■□□□□ 0.26
RFC1P35251 AC097359.3-201ENST00000603982 1210 ntBASIC16.69■□□□□ 0.26
RFC1P35251 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 Z92544.3-201ENST00000624747 417 ntBASIC16.69■□□□□ 0.26
RFC1P35251 AC009090.5-201ENST00000624886 2285 ntBASIC16.69■□□□□ 0.26
RFC1P35251 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RFC1P35251 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.69■□□□□ 0.26
RFC1P35251 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFC1P35251 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.69■□□□□ 0.26
RFC1P35251 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 KRT8P12-202ENST00000472924 1397 ntBASIC16.68■□□□□ 0.26
RFC1P35251 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
RFC1P35251 AC013268.4-201ENST00000637413 2228 ntBASIC16.68■□□□□ 0.26
RFC1P35251 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RFC1P35251 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.68■□□□□ 0.26
RFC1P35251 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.68■□□□□ 0.26
RFC1P35251 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.68■□□□□ 0.26
RFC1P35251 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.68■□□□□ 0.26
RFC1P35251 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFC1P35251 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 AC090616.6-203ENST00000579186 1945 ntBASIC16.68■□□□□ 0.26
RFC1P35251 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RFC1P35251 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
RFC1P35251 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFC1P35251 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RFC1P35251 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFC1P35251 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.67■□□□□ 0.26
RFC1P35251 PPT1-215ENST00000641471 2368 ntBASIC16.67■□□□□ 0.26
RFC1P35251 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms