Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
CKS2P33552 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS2P33552 BNIP3P18-201ENST00000593976 575 ntBASIC11.7□□□□□ -0.54
CKS2P33552 AL139424.1-201ENST00000607572 797 ntBASIC11.7□□□□□ -0.54
CKS2P33552 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.7□□□□□ -0.54
CKS2P33552 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 AC005363.2-201ENST00000618631 242 ntBASIC11.7□□□□□ -0.54
CKS2P33552 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 INTS4P1-203ENST00000641008 3683 ntBASIC11.7□□□□□ -0.54
CKS2P33552 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS2P33552 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS2P33552 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CKS2P33552 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS2P33552 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 AC233702.3-201ENST00000578656 1387 ntBASIC11.69□□□□□ -0.54
CKS2P33552 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.69□□□□□ -0.54
CKS2P33552 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 TERF1P1-201ENST00000311003 1181 ntBASIC11.69□□□□□ -0.54
CKS2P33552 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CKS2P33552 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CKS2P33552 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS2P33552 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 CHCHD2P8-201ENST00000429873 447 ntBASIC11.69□□□□□ -0.54
CKS2P33552 BX276092.5-203ENST00000456199 560 ntBASIC11.69□□□□□ -0.54
CKS2P33552 AL671277.2-201ENST00000458060 996 ntBASIC11.69□□□□□ -0.54
CKS2P33552 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS2P33552 AC114341.1-201ENST00000618070 349 ntBASIC11.69□□□□□ -0.54
CKS2P33552 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 AC005840.4-201ENST00000541242 2494 ntBASIC11.69□□□□□ -0.54
CKS2P33552 AJ011931.1-201ENST00000618749 2492 ntBASIC11.69□□□□□ -0.54
CKS2P33552 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CKS2P33552 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS2P33552 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms