Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RARAP10276 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RARAP10276 KRT8P37-201ENST00000451609 1420 ntBASIC16.62■□□□□ 0.25
RARAP10276 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 EEF1DP4-201ENST00000446006 880 ntBASIC16.62■□□□□ 0.25
RARAP10276 AC023141.5-201ENST00000458585 616 ntBASIC16.62■□□□□ 0.25
RARAP10276 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.62■□□□□ 0.25
RARAP10276 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.62■□□□□ 0.25
RARAP10276 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 AC105021.1-202ENST00000570572 669 ntBASIC16.62■□□□□ 0.25
RARAP10276 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.62■□□□□ 0.25
RARAP10276 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.62■□□□□ 0.25
RARAP10276 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.62■□□□□ 0.25
RARAP10276 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RARAP10276 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.62■□□□□ 0.25
RARAP10276 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RARAP10276 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.62■□□□□ 0.25
RARAP10276 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RARAP10276 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 AC254562.1-201ENST00000417586 456 ntBASIC16.61■□□□□ 0.25
RARAP10276 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 AL353705.2-201ENST00000428243 662 ntBASIC16.61■□□□□ 0.25
RARAP10276 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RARAP10276 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.61■□□□□ 0.25
RARAP10276 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.61■□□□□ 0.25
RARAP10276 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 AC134684.3-201ENST00000641758 218 ntBASIC16.61■□□□□ 0.25
RARAP10276 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
RARAP10276 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RARAP10276 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RARAP10276 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RARAP10276 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RARAP10276 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms