Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.78■□□□□ 0.92
CSB-PGBD3P0DP91 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 AP006547.1-201ENST00000563435 692 ntBASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 BX539320.1-201ENST00000623759 877 ntBASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSB-PGBD3P0DP91 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CSB-PGBD3P0DP91 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 FNTAP2-201ENST00000430308 634 ntBASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 RPSAP36-202ENST00000494591 1261 ntBASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 EEF1DP1-201ENST00000585891 896 ntBASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 AC106872.11-201ENST00000605838 421 ntBASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSB-PGBD3P0DP91 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms