Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 PIN1P1-201ENST00000412108 996 ntBASIC14.12□□□□□ -0.15
CNOT4O95628 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CNOT4O95628 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 AC007274.1-201ENST00000439805 662 ntBASIC14.12□□□□□ -0.15
CNOT4O95628 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 SERBP1P5-201ENST00000510079 1181 ntBASIC14.12□□□□□ -0.15
CNOT4O95628 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 AC010336.2-201ENST00000564226 506 ntBASIC14.12□□□□□ -0.15
CNOT4O95628 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.12□□□□□ -0.15
CNOT4O95628 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 KRT8P37-201ENST00000451609 1420 ntBASIC14.12□□□□□ -0.15
CNOT4O95628 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.12□□□□□ -0.15
CNOT4O95628 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CNOT4O95628 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CNOT4O95628 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNOT4O95628 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.11□□□□□ -0.15
CNOT4O95628 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CNOT4O95628 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 LINC02199-201ENST00000506655 2702 ntBASIC14.11□□□□□ -0.15
CNOT4O95628 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CNOT4O95628 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CNOT4O95628 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.11□□□□□ -0.15
CNOT4O95628 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.11□□□□□ -0.15
CNOT4O95628 AL359881.2-201ENST00000602973 570 ntBASIC14.11□□□□□ -0.15
CNOT4O95628 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 AC025048.6-201ENST00000634326 1161 ntBASIC14.11□□□□□ -0.15
CNOT4O95628 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 AC092850.2-201ENST00000623821 2697 ntBASIC14.11□□□□□ -0.15
CNOT4O95628 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 PCDHA1-201ENST00000378133 2726 ntBASIC14.11□□□□□ -0.15
CNOT4O95628 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CNOT4O95628 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.11□□□□□ -0.15
CNOT4O95628 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CNOT4O95628 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNOT4O95628 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNOT4O95628 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNOT4O95628 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CNOT4O95628 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CNOT4O95628 AC026691.1-201ENST00000602502 2017 ntBASIC14.1□□□□□ -0.15
CNOT4O95628 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNOT4O95628 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CNOT4O95628 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CNOT4O95628 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CNOT4O95628 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.1□□□□□ -0.15
CNOT4O95628 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CNOT4O95628 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CNOT4O95628 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms