Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXD3Q9UJU5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 MEIS3P1-201ENST00000495167 958 ntBASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AL162274.1-201ENST00000617191 1098 ntBASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AC007431.3-201ENST00000623221 587 ntBASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.15□□□□□ -0.14
FOXD3Q9UJU5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
FOXD3Q9UJU5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.15□□□□□ -0.15
FOXD3Q9UJU5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 ARSEP1-201ENST00000420443 635 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 INE1-201ENST00000456273 945 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 IGHV3-71-201ENST00000523324 359 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC092337.1-201ENST00000568699 1129 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC008494.3-201ENST00000606615 944 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC093726.1-201ENST00000608064 963 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 AC004461.2-201ENST00000629517 803 ntBASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FOXD3Q9UJU5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms