Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 FAM220BP-201ENST00000377689 816 ntBASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC142381.1-201ENST00000426099 345 ntBASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL513190.1-201ENST00000621254 727 ntBASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SHANK2-AS3Q9BTD1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC01101-201ENST00000622953 1884 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL355306.1-201ENST00000415580 579 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC009078.2-202ENST00000463353 338 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 RPL13AP23-201ENST00000480739 586 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 FAM86C2P-203ENST00000528684 1004 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRT126P-201ENST00000549467 1181 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL135744.1-201ENST00000565098 629 ntBASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SHANK2-AS3Q9BTD1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.21□□□□□ -0.46
SHANK2-AS3Q9BTD1 KRT8P37-201ENST00000451609 1420 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC091951.1-201ENST00000512854 2465 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 458.6 ms