Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.86■□□□□ 0.13
SIPA1Q96FS4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.85■□□□□ 0.13
SIPA1Q96FS4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.85■□□□□ 0.13
SIPA1Q96FS4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SIPA1Q96FS4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 C1QBPP1-201ENST00000400117 770 ntBASIC15.84■□□□□ 0.13
SIPA1Q96FS4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 VDAC1P7-201ENST00000462417 847 ntBASIC15.84■□□□□ 0.13
SIPA1Q96FS4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 AC124283.3-201ENST00000570869 594 ntBASIC15.84■□□□□ 0.13
SIPA1Q96FS4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SIPA1Q96FS4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms