Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 MIR1233-2-201ENST00000408138 82 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 MIR1233-1-201ENST00000408722 82 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 DNAJB3-202ENST00000449667 1266 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 AC027612.4-201ENST00000605371 583 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 AL133215.2-201ENST00000609242 977 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 AC023511.2-201ENST00000618803 211 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 LINC00628-201ENST00000628516 1289 ntBASIC14.84□□□□□ -0.03
NUP43Q8NFH3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NUP43Q8NFH3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NUP43Q8NFH3 LINC00554-201ENST00000564841 3011 ntBASIC14.83□□□□□ -0.04
NUP43Q8NFH3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 SPDYE17-201ENST00000412399 783 ntBASIC14.83□□□□□ -0.04
NUP43Q8NFH3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.83□□□□□ -0.04
NUP43Q8NFH3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 AC097359.3-201ENST00000603982 1210 ntBASIC14.83□□□□□ -0.04
NUP43Q8NFH3 AC006538.3-201ENST00000612495 578 ntBASIC14.83□□□□□ -0.04
NUP43Q8NFH3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NUP43Q8NFH3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.82□□□□□ -0.04
NUP43Q8NFH3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NUP43Q8NFH3 FO393414.2-201ENST00000405153 598 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms