Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 AC106881.1-201ENST00000605849 3329 ntBASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATPAF1Q5TC12 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 RPSAP43-201ENST00000402237 625 ntBASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 UPF3AP3-201ENST00000420996 769 ntBASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AL671277.1-201ENST00000429656 993 ntBASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ATPAF1Q5TC12 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AL355306.1-201ENST00000415580 579 ntBASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 GPX1P2-201ENST00000429271 606 ntBASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AC112482.1-201ENST00000492080 688 ntBASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 AC026748.1-201ENST00000624349 3251 ntBASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms