Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH4P55283 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 KRT18P43-201ENST00000469825 1281 ntBASIC16.13■□□□□ 0.17
CDH4P55283 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH4P55283 CHCHD2P3-201ENST00000603038 451 ntBASIC16.13■□□□□ 0.17
CDH4P55283 AC093726.1-201ENST00000608064 963 ntBASIC16.13■□□□□ 0.17
CDH4P55283 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH4P55283 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CDH4P55283 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH4P55283 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH4P55283 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH4P55283 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH4P55283 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH4P55283 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 AL133267.1-201ENST00000398220 340 ntBASIC16.12■□□□□ 0.17
CDH4P55283 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 RN7SL399P-201ENST00000471648 279 ntBASIC16.12■□□□□ 0.17
CDH4P55283 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH4P55283 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH4P55283 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.12■□□□□ 0.17
CDH4P55283 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH4P55283 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CDH4P55283 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH4P55283 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH4P55283 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 AL121723.1-201ENST00000445194 1519 ntBASIC16.12■□□□□ 0.17
CDH4P55283 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CDH4P55283 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDH4P55283 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH4P55283 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH4P55283 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH4P55283 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 CLK3P2-201ENST00000427566 1453 ntBASIC16.11■□□□□ 0.17
CDH4P55283 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.11■□□□□ 0.17
CDH4P55283 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 AC104596.2-201ENST00000512793 793 ntBASIC16.11■□□□□ 0.17
CDH4P55283 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH4P55283 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH4P55283 AC123567.1-201ENST00000548294 1261 ntBASIC16.11■□□□□ 0.17
CDH4P55283 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH4P55283 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH4P55283 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH4P55283 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH4P55283 AC007431.3-201ENST00000623221 587 ntBASIC16.11■□□□□ 0.17
CDH4P55283 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDH4P55283 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH4P55283 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms