Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 SNX15-201ENST00000352068 771 ntTSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC026316.1-201ENST00000398900 414 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 DDX39AP1-201ENST00000445147 1181 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 AC093433.1-201ENST00000458048 571 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 POU5F1P6-201ENST00000466990 990 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC019193.1-201ENST00000506678 823 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC124283.3-201ENST00000570869 594 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 AL391069.4-201ENST00000609583 481 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.14■□□□□ 0.17
COL9A1P20849 AC103691.2-201ENST00000618824 433 ntBASIC16.14■□□□□ 0.17
COL9A1P20849 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.14■□□□□ 0.17
COL9A1P20849 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL9A1P20849 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COL9A1P20849 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC004987.2-201ENST00000395959 1148 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.13■□□□□ 0.17
COL9A1P20849 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.13■□□□□ 0.17
COL9A1P20849 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AC012618.1-201ENST00000461223 412 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC16.13■□□□□ 0.17
COL9A1P20849 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 PPY2P-201ENST00000582808 702 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC092171.5-201ENST00000608012 942 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 AL158212.4-201ENST00000624062 1286 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 AL805961.1-201ENST00000642026 753 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.13■□□□□ 0.17
COL9A1P20849 AC138932.1-201ENST00000534164 6830 ntBASIC16.13■□□□□ 0.17
COL9A1P20849 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
COL9A1P20849 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL9A1P20849 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL9A1P20849 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms