Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DUX4L47-201ENST00000566374 394 ntBASIC20.51■□□□□ 0.87
LTN1O94822 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.51■□□□□ 0.87
LTN1O94822 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
LTN1O94822 AP001002.3-201ENST00000623482 206 ntBASIC20.51■□□□□ 0.87
LTN1O94822 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 AC055811.4-201ENST00000624039 1754 ntBASIC20.51■□□□□ 0.87
LTN1O94822 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.51■□□□□ 0.87
LTN1O94822 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
LTN1O94822 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LTN1O94822 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.51■□□□□ 0.87
LTN1O94822 COX5BP1-201ENST00000507622 393 ntBASIC20.51■□□□□ 0.87
LTN1O94822 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.51■□□□□ 0.87
LTN1O94822 AC104982.3-201ENST00000581995 514 ntBASIC20.51■□□□□ 0.87
LTN1O94822 AC106872.11-201ENST00000605838 421 ntBASIC20.51■□□□□ 0.87
LTN1O94822 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTN1O94822 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LTN1O94822 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
LTN1O94822 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LTN1O94822 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.5■□□□□ 0.87
LTN1O94822 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.5■□□□□ 0.87
LTN1O94822 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LTN1O94822 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.5■□□□□ 0.87
LTN1O94822 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LTN1O94822 NKAIN1P1-201ENST00000435754 582 ntBASIC20.5■□□□□ 0.87
LTN1O94822 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.5■□□□□ 0.87
LTN1O94822 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.5■□□□□ 0.87
LTN1O94822 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.5■□□□□ 0.87
LTN1O94822 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.5■□□□□ 0.87
LTN1O94822 AP001505.2-201ENST00000616815 443 ntBASIC20.5■□□□□ 0.87
LTN1O94822 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTN1O94822 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 CLUHP2-201ENST00000426660 1303 ntBASIC20.49■□□□□ 0.87
LTN1O94822 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.49■□□□□ 0.87
LTN1O94822 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 AL136309.1-201ENST00000403917 691 ntBASIC20.49■□□□□ 0.87
LTN1O94822 RN7SKP175-201ENST00000408472 289 ntBASIC20.49■□□□□ 0.87
LTN1O94822 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.49■□□□□ 0.87
LTN1O94822 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.49■□□□□ 0.87
LTN1O94822 AC005077.2-201ENST00000449786 690 ntBASIC20.49■□□□□ 0.87
LTN1O94822 BX284668.4-201ENST00000453917 508 ntBASIC20.49■□□□□ 0.87
LTN1O94822 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.49■□□□□ 0.87
LTN1O94822 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LTN1O94822 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
LTN1O94822 RNF165-205ENST00000588679 2904 ntBASIC20.49■□□□□ 0.87
LTN1O94822 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.49■□□□□ 0.87
LTN1O94822 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.49■□□□□ 0.87
LTN1O94822 AC016700.1-201ENST00000429424 312 ntBASIC20.49■□□□□ 0.87
LTN1O94822 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.49■□□□□ 0.87
LTN1O94822 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.49■□□□□ 0.87
LTN1O94822 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.49■□□□□ 0.87
LTN1O94822 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.49■□□□□ 0.87
LTN1O94822 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.49■□□□□ 0.87
LTN1O94822 AC091812.3-201ENST00000621362 345 ntBASIC20.49■□□□□ 0.87
LTN1O94822 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTN1O94822 AC127383.1-201ENST00000444697 1800 ntBASIC20.48■□□□□ 0.87
LTN1O94822 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.48■□□□□ 0.87
LTN1O94822 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTN1O94822 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms