Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 CICP14-201ENST00000629111 2732 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 POM121L3P-201ENST00000419331 1163 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MIR5100-201ENST00000579544 119 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AC005412.3-201ENST00000580309 715 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 NKAPP1-205ENST00000585790 367 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AP005117.1-201ENST00000584346 1413 ntBASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
SMKR1H3BMG3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 DRAXINP1-201ENST00000437611 948 ntBASIC11.64□□□□□ -0.55
SMKR1H3BMG3 TSSC2-201ENST00000450217 709 ntBASIC11.64□□□□□ -0.55
SMKR1H3BMG3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AP002414.4-201ENST00000589764 1148 ntBASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AC012306.2-201ENST00000609350 630 ntBASIC11.64□□□□□ -0.55
SMKR1H3BMG3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 AL589182.2-201ENST00000619332 1049 ntBASIC11.64□□□□□ -0.55
SMKR1H3BMG3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMKR1H3BMG3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms