Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC073648.2-201ENST00000510116 352 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC105339.3-201ENST00000560043 636 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CLEC4GP1-201ENST00000596555 870 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC007191.1-201ENST00000623179 2995 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AP002414.3-201ENST00000589352 1468 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 AC126365.1-201ENST00000578585 1514 ntBASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM235A6NFC5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM235A6NFC5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.58□□□□□ -0.23
TMEM235A6NFC5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM235A6NFC5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 AL390755.1-201ENST00000623716 2027 ntBASIC13.58□□□□□ -0.24
TMEM235A6NFC5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.58□□□□□ -0.24
TMEM235A6NFC5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 AL078644.1-201ENST00000609881 752 ntBASIC13.58□□□□□ -0.24
TMEM235A6NFC5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM235A6NFC5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AC127383.1-201ENST00000444697 1800 ntBASIC13.57□□□□□ -0.24
TMEM235A6NFC5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM235A6NFC5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms