Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 FAM220BP-201ENST00000377689 816 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AL355306.1-201ENST00000415580 579 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AL590627.1-203ENST00000421194 1026 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 MED15P5-201ENST00000423150 992 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AC027307.2-201ENST00000591252 911 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 AL513190.1-201ENST00000621254 727 ntBASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
THUMPD1Q9NXG2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 TFAMP1-201ENST00000412727 736 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AL135744.1-201ENST00000565098 629 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AC106730.1-201ENST00000566722 1090 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AL138918.1-201ENST00000568306 659 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AC026979.3-201ENST00000607315 403 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 AL009178.2-201ENST00000597278 2719 ntBASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
THUMPD1Q9NXG2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
THUMPD1Q9NXG2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 MIR600HG-201ENST00000449175 5984 ntBASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 RPS8P6-201ENST00000426177 609 ntBASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.95□□□□□ -0.02
THUMPD1Q9NXG2 KRT8P23-201ENST00000560090 1207 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms