Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AC245100.3-201ENST00000441281 285 ntBASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AC079316.1-201ENST00000548397 411 ntBASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 RN7SL560P-201ENST00000577943 264 ntBASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AC011477.6-201ENST00000604980 1927 ntBASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
HCFC1R1Q9NWW0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 PCDHA14-201ENST00000506751 2298 ntBASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 CNN2P8-201ENST00000421872 913 ntBASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 AC025279.2-201ENST00000569730 653 ntBASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCFC1R1Q9NWW0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AL596087.1-201ENST00000400979 1969 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 BCYRN1-201ENST00000418539 200 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 FAM197Y7-201ENST00000432892 766 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 GAPDHP40-201ENST00000505218 1006 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 ZNF767P-206ENST00000513792 565 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AC243960.2-201ENST00000600996 747 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 AC008687.7-202ENST00000637404 953 ntBASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
HCFC1R1Q9NWW0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms