Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 CALR4P-201ENST00000431943 946 ntBASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AC012441.1-201ENST00000446669 685 ntBASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 AC009486.1-201ENST00000569860 813 ntBASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM7Q9NR12 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 AC010491.1-201ENST00000563101 2797 ntBASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 MIR326-201ENST00000362220 95 ntBASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 KRT18P64-201ENST00000434946 1219 ntBASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 AC008687.7-202ENST00000637404 953 ntBASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PDLIM7Q9NR12 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC134312.5-201ENST00000568031 1313 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC018695.7-201ENST00000624587 2492 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 TOMM22P5-201ENST00000416399 439 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 RPL13AP25-201ENST00000484130 612 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AC120045.2-201ENST00000567334 178 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AL049840.4-201ENST00000602422 811 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 AL022328.3-201ENST00000607943 679 ntBASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM7Q9NR12 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDLIM7Q9NR12 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms