Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 KRT8P23-201ENST00000560090 1207 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AL450472.2-201ENST00000603663 1156 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC112693.3-201ENST00000624819 1983 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 CYP4F24P-201ENST00000586049 1580 ntBASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 MCCD1P2-201ENST00000423228 335 ntBASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 TIMM8BP1-201ENST00000452384 211 ntBASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 KRT18P58-201ENST00000527480 1120 ntBASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AC127383.1-201ENST00000444697 1800 ntBASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRTM1Q9HBL6 C18orf15-201ENST00000623680 2534 ntBASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 KRT8P37-201ENST00000451609 1420 ntBASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 ACTG1P14-201ENST00000446382 1122 ntBASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 AC026979.3-201ENST00000607315 403 ntBASIC15.27■□□□□ 0.04
LRTM1Q9HBL6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms