Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNGAP1Q96PV0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 FO681548.1-201ENST00000455617 1132 ntBASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 PHKG1P2-201ENST00000457537 863 ntBASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 AC120045.2-201ENST00000567334 178 ntBASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 AL049840.4-201ENST00000602422 811 ntBASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SYNGAP1Q96PV0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AC092506.1-202ENST00000401022 528 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AC099336.1-201ENST00000417053 1171 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 ACTBP11-201ENST00000436287 1126 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 RNA5SP412-201ENST00000516234 123 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AP001889.1-201ENST00000525414 633 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AC026691.1-201ENST00000602502 2017 ntBASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNGAP1Q96PV0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 AC134407.2-201ENST00000625089 1978 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms