Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 NKAIN1P1-201ENST00000435754 582 ntBASIC18.95■□□□□ 0.62
SNED1Q8TER0 SPTLC1P5-201ENST00000450718 252 ntBASIC18.95■□□□□ 0.62
SNED1Q8TER0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 MIR4313-201ENST00000580760 101 ntBASIC18.95■□□□□ 0.62
SNED1Q8TER0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
SNED1Q8TER0 AL354989.2-201ENST00000435838 1540 ntBASIC18.95■□□□□ 0.62
SNED1Q8TER0 AC011477.6-201ENST00000604980 1927 ntBASIC18.95■□□□□ 0.62
SNED1Q8TER0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNED1Q8TER0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 MIR33B-201ENST00000385104 96 ntBASIC18.94■□□□□ 0.62
SNED1Q8TER0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 AC073413.1-201ENST00000603927 732 ntBASIC18.94■□□□□ 0.62
SNED1Q8TER0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SNED1Q8TER0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNED1Q8TER0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 CYP46A4P-201ENST00000414953 267 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 RPS2P36-201ENST00000456516 831 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 AC005730.2-201ENST00000564549 1184 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 RN7SL574P-201ENST00000581512 297 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 MIR6727-201ENST00000620702 65 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 AC128714.1-201ENST00000637035 887 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 AC006449.6-201ENST00000612330 2296 ntBASIC18.93■□□□□ 0.62
SNED1Q8TER0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SNED1Q8TER0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNED1Q8TER0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNED1Q8TER0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 SERPINA13P-202ENST00000478994 924 ntBASIC18.92■□□□□ 0.62
SNED1Q8TER0 TMEM198B-204ENST00000484016 896 ntBASIC18.92■□□□□ 0.62
SNED1Q8TER0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.92■□□□□ 0.62
SNED1Q8TER0 SPCS2P2-201ENST00000603270 608 ntBASIC18.92■□□□□ 0.62
SNED1Q8TER0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms