Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00346Q8IVM7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00346Q8IVM7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.08□□□□□ -0.15
LINC00346Q8IVM7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00346Q8IVM7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00346Q8IVM7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ELL2P1-201ENST00000413990 1906 ntBASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 RPS8P6-201ENST00000426177 609 ntBASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00346Q8IVM7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC068418.2-201ENST00000577309 3703 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC105250.1-201ENST00000509378 2057 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC004987.2-201ENST00000395959 1148 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC005237.2-201ENST00000434368 219 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 CYP4F24P-201ENST00000586049 1580 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00346Q8IVM7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms