Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS4XP62701 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RPS4XP62701 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.33□□□□□ -0.12
RPS4XP62701 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 RARRES2P9-201ENST00000565168 469 ntBASIC14.33□□□□□ -0.12
RPS4XP62701 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RPS4XP62701 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.33□□□□□ -0.12
RPS4XP62701 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS4XP62701 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPS4XP62701 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS4XP62701 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 AC138035.3-201ENST00000622706 2791 ntBASIC14.33□□□□□ -0.12
RPS4XP62701 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RPS4XP62701 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS4XP62701 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 AC055876.3-201ENST00000431496 288 ntBASIC14.32□□□□□ -0.12
RPS4XP62701 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 AC138761.1-201ENST00000584393 385 ntBASIC14.32□□□□□ -0.12
RPS4XP62701 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS4XP62701 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AL390955.2-201ENST00000603032 514 ntBASIC14.32□□□□□ -0.12
RPS4XP62701 AC239800.4-201ENST00000603712 296 ntBASIC14.32□□□□□ -0.12
RPS4XP62701 AC138649.4-201ENST00000612222 287 ntBASIC14.32□□□□□ -0.12
RPS4XP62701 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS4XP62701 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS4XP62701 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS4XP62701 AC127383.1-201ENST00000444697 1800 ntBASIC14.31□□□□□ -0.12
RPS4XP62701 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPS4XP62701 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.31□□□□□ -0.12
RPS4XP62701 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RPS4XP62701 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPS4XP62701 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.31□□□□□ -0.12
RPS4XP62701 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.31□□□□□ -0.12
RPS4XP62701 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.31□□□□□ -0.12
RPS4XP62701 GPS2P2-201ENST00000430745 888 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms