Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PCK1P35558 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCK1P35558 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCK1P35558 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCK1P35558 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCK1P35558 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
PCK1P35558 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCK1P35558 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCK1P35558 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
PCK1P35558 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCK1P35558 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCK1P35558 AC004461.1-201ENST00000412461 403 ntBASIC16.77■□□□□ 0.28
PCK1P35558 UPF3AP3-201ENST00000420996 769 ntBASIC16.77■□□□□ 0.28
PCK1P35558 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.77■□□□□ 0.28
PCK1P35558 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
PCK1P35558 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCK1P35558 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCK1P35558 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCK1P35558 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCK1P35558 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PCK1P35558 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCK1P35558 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
PCK1P35558 AC126177.1-201ENST00000547829 2218 ntBASIC16.77■□□□□ 0.27
PCK1P35558 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCK1P35558 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCK1P35558 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.77■□□□□ 0.27
PCK1P35558 BNIP3P1-202ENST00000550043 1585 ntBASIC16.77■□□□□ 0.27
PCK1P35558 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.77■□□□□ 0.27
PCK1P35558 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 AC005237.2-201ENST00000434368 219 ntBASIC16.76■□□□□ 0.27
PCK1P35558 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.76■□□□□ 0.27
PCK1P35558 AL139010.1-201ENST00000454878 894 ntBASIC16.76■□□□□ 0.27
PCK1P35558 AP000344.2-201ENST00000512987 629 ntBASIC16.76■□□□□ 0.27
PCK1P35558 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 AC010327.4-202ENST00000591484 748 ntBASIC16.76■□□□□ 0.27
PCK1P35558 AC026979.3-201ENST00000607315 403 ntBASIC16.76■□□□□ 0.27
PCK1P35558 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCK1P35558 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.76■□□□□ 0.27
PCK1P35558 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
PCK1P35558 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 SBF1P1-201ENST00000444527 5631 ntBASIC16.75■□□□□ 0.27
PCK1P35558 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCK1P35558 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.75■□□□□ 0.27
PCK1P35558 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
PCK1P35558 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCK1P35558 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.75■□□□□ 0.27
PCK1P35558 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms