Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXD8P13378 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXD8P13378 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXD8P13378 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 RNU1-114P-201ENST00000365297 166 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 KLF2P2-201ENST00000416807 1039 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXD8P13378 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 AC114812.1-204ENST00000449669 728 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXD8P13378 FAM86HP-204ENST00000513466 959 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 AC023310.1-201ENST00000554836 735 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 RN7SL219P-201ENST00000582872 296 ntBASIC17.25■□□□□ 0.35
HOXD8P13378 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXD8P13378 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXD8P13378 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
HOXD8P13378 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXD8P13378 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 AC006449.5-201ENST00000610658 2098 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXD8P13378 BRWD1P1-201ENST00000401091 371 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 NUS1P3-201ENST00000423502 862 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXD8P13378 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 RN7SL560P-201ENST00000577943 264 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 AC138951.2-201ENST00000623455 1161 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 AL645728.2-202ENST00000641679 227 ntBASIC17.24■□□□□ 0.35
HOXD8P13378 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXD8P13378 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXD8P13378 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXD8P13378 AC099398.1-201ENST00000567919 2776 ntBASIC17.23■□□□□ 0.35
HOXD8P13378 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXD8P13378 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXD8P13378 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXD8P13378 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HOXD8P13378 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXD8P13378 AC022188.1-201ENST00000620960 1664 ntBASIC17.23■□□□□ 0.35
HOXD8P13378 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXD8P13378 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms