Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RARBP10826 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RARBP10826 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
RARBP10826 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RARBP10826 ACKR1-201ENST00000368121 1240 ntBASIC17.67■□□□□ 0.42
RARBP10826 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RARBP10826 KRT18P43-201ENST00000469825 1281 ntBASIC17.67■□□□□ 0.42
RARBP10826 AC022137.2-201ENST00000503482 481 ntBASIC17.67■□□□□ 0.42
RARBP10826 HNRNPUP1-201ENST00000554987 333 ntBASIC17.67■□□□□ 0.42
RARBP10826 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.67■□□□□ 0.42
RARBP10826 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
RARBP10826 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RARBP10826 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RARBP10826 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RARBP10826 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.67■□□□□ 0.42
RARBP10826 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RARBP10826 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RARBP10826 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.66■□□□□ 0.42
RARBP10826 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 KRT8P13-201ENST00000463294 1010 ntBASIC17.66■□□□□ 0.42
RARBP10826 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.66■□□□□ 0.42
RARBP10826 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RARBP10826 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.66■□□□□ 0.42
RARBP10826 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.66■□□□□ 0.42
RARBP10826 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 AL121723.1-201ENST00000445194 1519 ntBASIC17.66■□□□□ 0.42
RARBP10826 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RARBP10826 AC134407.2-201ENST00000625089 1978 ntBASIC17.66■□□□□ 0.42
RARBP10826 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
RARBP10826 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.66■□□□□ 0.42
RARBP10826 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.66■□□□□ 0.42
RARBP10826 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.65■□□□□ 0.42
RARBP10826 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.65■□□□□ 0.42
RARBP10826 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
RARBP10826 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RARBP10826 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.65■□□□□ 0.42
RARBP10826 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RARBP10826 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.65■□□□□ 0.42
RARBP10826 AC006033.1-201ENST00000440505 426 ntBASIC17.65■□□□□ 0.42
RARBP10826 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.65■□□□□ 0.42
RARBP10826 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.65■□□□□ 0.42
RARBP10826 GNRHR2-203ENST00000581100 1187 ntBASIC17.65■□□□□ 0.42
RARBP10826 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.65■□□□□ 0.42
RARBP10826 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.65■□□□□ 0.42
RARBP10826 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms