Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
GGPS1O95749 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.74■□□□□ 0.43
GGPS1O95749 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 MTHFR-217ENST00000641820 1569 ntBASIC17.74■□□□□ 0.43
GGPS1O95749 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GGPS1O95749 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 AL596087.1-201ENST00000400979 1969 ntBASIC17.73■□□□□ 0.43
GGPS1O95749 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
GGPS1O95749 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.73■□□□□ 0.43
GGPS1O95749 AL162726.2-201ENST00000438986 1017 ntBASIC17.73■□□□□ 0.43
GGPS1O95749 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.73■□□□□ 0.43
GGPS1O95749 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.73■□□□□ 0.43
GGPS1O95749 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.73■□□□□ 0.43
GGPS1O95749 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 AC015936.2-201ENST00000593177 259 ntBASIC17.73■□□□□ 0.43
GGPS1O95749 CU634019.7-201ENST00000624153 1185 ntBASIC17.73■□□□□ 0.43
GGPS1O95749 FP236241.2-201ENST00000624906 1185 ntBASIC17.73■□□□□ 0.43
GGPS1O95749 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.73■□□□□ 0.43
GGPS1O95749 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GGPS1O95749 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GGPS1O95749 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.72■□□□□ 0.43
GGPS1O95749 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.72■□□□□ 0.43
GGPS1O95749 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 MIR658-201ENST00000385210 100 ntBASIC17.72■□□□□ 0.43
GGPS1O95749 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.72■□□□□ 0.43
GGPS1O95749 MIR6805-201ENST00000615055 62 ntBASIC17.72■□□□□ 0.43
GGPS1O95749 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
GGPS1O95749 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GGPS1O95749 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.72■□□□□ 0.43
GGPS1O95749 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GGPS1O95749 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.72■□□□□ 0.43
GGPS1O95749 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GGPS1O95749 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GGPS1O95749 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.71■□□□□ 0.43
GGPS1O95749 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms